ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 303208.00 29.73 501.60 56.14 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 9.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 4.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 635.00 0.06 1.05 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 157.00 43.25 0.26 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 70.00 0.01 0.12 98.59 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 286.00 7.05 0.47 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 882.00 21.75 1.46 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 2564.00 33.02 4.24 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 15.00 0.10 0.02 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 1474.00 0.31 2.44 40.27 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 4.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 1280.00 31.66 2.12 79.8 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 727.00 17.98 1.20 36.22 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 77.00 7.14 0.13 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1670.00 0.16 2.76 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 616104.00 60.42 1019.23 94.18 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 272.00 11.55 0.45 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 76.00 0.81 0.13 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 7.00 0.23 0.01 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 122.00 0.90 0.20 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 497.00 3.65 0.82 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 123.00 0.90 0.20 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 80.00 0.59 0.13 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 241.00 1.77 0.40 99.59 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA uterus (Tissue)