ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 9112.00 1.85 15.07 100.0 ZFAS1-238 lncRNA uterus (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 3305.00 0.67 5.47 100.0 ZFAS1-238 lncRNA uterus (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 87821.00 86.20 145.28 100.0 ZFAS1-242 lncRNA uterus (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 6859.00 6.73 11.35 100.0 ZFAS1-242 lncRNA uterus (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 41.00 36.94 0.07 100.0 ENST00000837997 lncRNA uterus (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 11.00 9.91 0.02 100.0 ENST00000837997 lncRNA uterus (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 8543.00 69.45 14.13 77.11 ENST00000839036 lncRNA uterus (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 74.00 20.61 0.12 100.0 ENST00000849527 lncRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 83048.00 87.10 137.39 96.01 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 20.00 0.02 0.03 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 1946.00 0.05 3.22 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 5306.00 52.31 8.78 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 1849.00 18.23 3.06 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 80.00 5.26 0.13 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 7.00 0.93 0.01 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 11507.00 65.78 19.04 89.66 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 214.00 0.01 0.35 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 112.00 54.63 0.19 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 254.00 1.05 0.42 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 7573.00 31.23 12.53 97.75 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 5.00 0.02 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 936.00 21.66 1.55 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 450.00 0.04 0.74 89.11 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 212.00 0.02 0.35 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA uterus (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 109.00 0.01 0.18 87.9 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA uterus (Tissue)