ENCFF001RMC
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | temporal lobe (Tissue) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR000AGD |
| Description: | Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000363124.1 | ENST00000363124.1_17_32_+ | 17–32 | 82.00 | 1.44 | 0.17 | 78.85 | RNA5SP145-201 | rRNA pseudogene | temporal lobe (Tissue) |
| ENST00000363182.1 | ENST00000363182.1_1_32_+ | 1–32 | 2347.00 | 19.63 | 4.80 | 100.0 | Y_RNA.105-201 | misc RNA | temporal lobe (Tissue) |
| ENST00000363194.1 | ENST00000363194.1_1_32_+ | 1–32 | 7584.00 | 19.82 | 15.52 | 100.0 | RNY4P9-201 | misc RNA | temporal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_1_69_+ | 1–69 | 951.00 | 1.27 | 1.95 | 100.0 | RNU5B-1-201 | snRNA | temporal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_68_116_+ | 68–116 | 3545.00 | 4.74 | 7.26 | 100.0 | RNU5B-1-201 | snRNA | temporal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_1_86_+ | 1–86 | 5006.00 | 6.69 | 10.25 | 100.0 | RNU5B-1-201 | snRNA | temporal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_55_116_+ | 55–116 | 1448.00 | 1.94 | 2.96 | 100.0 | RNU5B-1-201 | snRNA | temporal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_63_116_+ | 63–116 | 4250.00 | 5.68 | 8.70 | 100.0 | RNU5B-1-201 | snRNA | temporal lobe (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_1_78_+ | 1–78 | 13654.00 | 18.25 | 27.95 | 78.54 | RNU5B-1-201 | snRNA | temporal lobe (Tissue) |
| ENST00000363293.1 | ENST00000363293.1_2_82_+ | 2–82 | 188347.00 | 89.03 | 385.50 | 97.19 | SNORD115-18-201 | snoRNA | temporal lobe (Tissue) |
| ENST00000363341.1 | ENST00000363341.1_1_36_+ | 1–36 | 2276.00 | 1.54 | 4.66 | 47.82 | RNY4P27-201 | misc RNA | temporal lobe (Tissue) |
| ENST00000363341.1 | ENST00000363341.1_1_32_+ | 1–32 | 92889.00 | 62.97 | 190.12 | 97.4 | RNY4P27-201 | misc RNA | temporal lobe (Tissue) |
| ENST00000363444.1 | ENST00000363444.1_74_99_+ | 74–99 | 5145.00 | 13.05 | 10.53 | 100.0 | Y_RNA.136-201 | misc RNA | temporal lobe (Tissue) |
| ENST00000363608.1 | ENST00000363608.1_2_82_+ | 2–82 | 53170.00 | 42.22 | 108.83 | 100.0 | SNORD115-41-201 | snoRNA | temporal lobe (Tissue) |
| ENST00000363633.1 | ENST00000363633.1_2_82_+ | 2–82 | 30479.00 | 28.24 | 62.38 | 100.0 | SNORD115-5-201 | snoRNA | temporal lobe (Tissue) |
| ENST00000363723.1 | ENST00000363723.1_2_82_+ | 2–82 | 15353.00 | 31.58 | 31.42 | 100.0 | SNORD115-33-201 | snoRNA | temporal lobe (Tissue) |
| ENST00000363742.1 | ENST00000363742.1_4_67_+ | 4–67 | 10832.00 | 83.88 | 22.17 | 99.39 | SNORD114-25-201 | snoRNA | temporal lobe (Tissue) |
| ENST00000363762.1 | ENST00000363762.1_3_72_+ | 3–72 | 18566.00 | 88.79 | 38.00 | 100.0 | SNORD113-7-201 | snoRNA | temporal lobe (Tissue) |
| ENST00000363856.1 | ENST00000363856.1_2_82_+ | 2–82 | 8875.00 | 13.37 | 18.16 | 100.0 | SNORD115-8-201 | snoRNA | temporal lobe (Tissue) |
| ENST00000363872.1 | ENST00000363872.1_74_98_+ | 74–98 | 1860.00 | 36.24 | 3.81 | 100.0 | Y_RNA.181-201 | misc RNA | temporal lobe (Tissue) |
| ENST00000363887.1 | ENST00000363887.1_2_82_+ | 2–82 | 37530.00 | 33.58 | 76.81 | 100.0 | SNORD115-16-201 | snoRNA | temporal lobe (Tissue) |
| ENST00000364079.1 | ENST00000364079.1_2_82_+ | 2–82 | 9852.00 | 41.04 | 20.16 | 100.0 | SNORD115-32-201 | snoRNA | temporal lobe (Tissue) |
| ENST00000364117.1 | ENST00000364117.1_2_82_+ | 2–82 | 18367.00 | 33.33 | 37.59 | 100.0 | SNORD115-30-201 | snoRNA | temporal lobe (Tissue) |
| ENST00000364228.1 | ENST00000364228.1_1_30_+ | 1–30 | 3571.40 | 3.37 | 7.31 | 25.16 | RNY1-201 | misc RNA | temporal lobe (Tissue) |
| ENST00000364228.1 | ENST00000364228.1_1_63_+ | 1–63 | 5627.00 | 5.32 | 11.52 | 100.0 | RNY1-201 | misc RNA | temporal lobe (Tissue) |