ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 460.00 38.08 0.94 100.0 SNORA31-201 snoRNA temporal lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 1.00 0.02 0.00 100.0 RNA5SP389-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 4.00 0.07 0.01 66.67 RNA5SP389-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 5.00 0.09 0.01 62.5 RNA5SP389-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 2.00 0.04 0.00 100.0 RNA5SP389-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1356.00 2.54 2.78 77.22 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 939.00 1.76 1.92 100.0 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 6018.69 11.28 12.32 36.02 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 1765.00 3.31 3.61 75.65 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 98.00 0.18 0.20 100.0 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 230.00 0.43 0.47 25.5 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 2367.00 4.44 4.84 45.29 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 639.01 1.20 1.31 56.8 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1434.00 2.69 2.94 57.78 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1241.00 2.33 2.54 54.41 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 2549.00 4.78 5.22 100.0 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 11140.36 20.89 22.80 69.72 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 453.02 0.85 0.93 30.94 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 4110.00 7.71 8.41 72.26 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 964.00 1.81 1.97 91.72 RNU5A-1-201 snRNA temporal lobe (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 2801.00 76.09 5.73 100.0 SNORD114-14-201 snoRNA temporal lobe (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1293.00 3.93 2.65 100.0 SNORD104-201 snoRNA temporal lobe (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 2366.00 7.20 4.84 100.0 SNORD104-201 snoRNA temporal lobe (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 108623.00 57.10 222.32 95.63 SNORD115-9-201 snoRNA temporal lobe (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 2136.00 29.66 4.37 75.08 RNA5SP358-201 rRNA pseudogene temporal lobe (Tissue)