ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 362.00 15.23 0.74 90.73 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 144.00 6.06 0.29 28.46 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 60.00 1.45 0.12 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 1332843.00 79.35 2727.99 95.49 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 2678.00 0.16 5.48 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 378.00 9.80 0.77 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 44.00 0.22 0.09 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 20.00 0.18 0.04 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 615.00 1.15 1.26 99.51 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 57.00 0.11 0.12 24.46 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 228.00 0.43 0.47 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 1278.00 2.40 2.62 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 37.00 0.07 0.08 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 92.00 0.17 0.19 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 32.00 0.42 0.07 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 1064.00 13.85 2.18 28.43 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 25.00 0.30 0.05 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 252.00 0.06 0.52 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 392337.00 90.84 803.01 98.39 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 251.00 0.06 0.51 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 393.00 0.09 0.80 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 9.00 0.00 0.02 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 18.00 0.27 0.04 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 24695.00 47.89 50.54 65.67 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 5.00 0.08 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA temporal lobe (Tissue)