ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 1168.00 20.13 2.39 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 2387.00 41.14 4.89 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 43.00 3.68 0.09 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 45.00 2.22 0.09 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 9056.00 53.52 18.54 82.39 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 115.00 0.01 0.24 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 16497.00 56.09 33.77 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 4783.00 13.45 9.79 98.76 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 2.00 0.01 0.00 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 64.00 0.18 0.13 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 1643.00 29.00 3.36 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 13.00 0.00 0.03 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 960.00 0.06 1.96 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 544.00 0.03 1.11 81.19 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 726.00 0.04 1.49 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 118.00 0.01 0.24 81.38 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 173401.00 10.32 354.91 39.8 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 6.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 385.00 44.25 0.79 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 14.00 0.00 0.03 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 1033.00 20.02 2.11 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 1761.00 34.13 3.60 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 2638.00 31.62 5.40 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 16.00 0.24 0.03 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 1862.00 0.20 3.81 12.46 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA temporal lobe (Tissue)