ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 327239.15 46.91 669.77 50.79 MIR17HG-214 lncRNA temporal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 17848.00 2.56 36.53 100.0 MIR17HG-214 lncRNA temporal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 179.00 0.03 0.37 100.0 MIR17HG-214 lncRNA temporal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 10760.00 1.54 22.02 100.0 MIR17HG-214 lncRNA temporal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 2463.00 0.35 5.04 100.0 MIR17HG-214 lncRNA temporal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 1709.00 0.42 3.50 100.0 SNHG32-223 lncRNA temporal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 1117.00 0.27 2.29 100.0 SNHG32-223 lncRNA temporal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 1140.00 0.28 2.33 100.0 SNHG32-223 lncRNA temporal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 3550.00 0.87 7.27 59.26 SNHG32-223 lncRNA temporal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 386839.00 95.13 791.76 100.0 SNHG32-223 lncRNA temporal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 43961.00 75.46 89.98 95.85 SNHG32-227 lncRNA temporal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 813.00 1.40 1.66 100.0 SNHG32-227 lncRNA temporal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 1720.00 2.95 3.52 100.0 SNHG32-227 lncRNA temporal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 2310.00 3.97 4.73 100.0 SNHG32-227 lncRNA temporal lobe (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 1508.00 80.90 3.09 100.0 B4GALT1-203 nonsense mediated decay temporal lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 500.00 1.45 1.02 100.0 ENST00000722183 lncRNA temporal lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 13310.00 38.69 27.24 69.65 ENST00000722183 lncRNA temporal lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 6594.00 19.17 13.50 100.0 ENST00000722183 lncRNA temporal lobe (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 308.00 80.00 0.63 100.0 MIR34BHG-202 lncRNA temporal lobe (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 56129.00 81.95 114.88 86.04 THBS3-AS1-228 lncRNA temporal lobe (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 50.00 67.57 0.10 100.0 MIR200CHG-202 lncRNA temporal lobe (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 1.00 1.35 0.00 100.0 MIR200CHG-202 lncRNA temporal lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 272.00 1.74 0.56 100.0 SNHG16-266 lncRNA temporal lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 2694.00 17.23 5.51 100.0 SNHG16-266 lncRNA temporal lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 1783.00 11.41 3.65 100.0 SNHG16-266 lncRNA temporal lobe (Tissue)