ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_1641_1722_+ 1641–1722 1.00 0.00 0.00 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 211.00 0.01 0.43 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 2884.00 15.21 5.90 100.0 FTX-219 lncRNA temporal lobe (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 6799.00 35.85 13.92 79.58 FTX-219 lncRNA temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 261.00 4.79 0.53 48.69 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 44.00 0.81 0.09 67.69 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 813.00 14.91 1.66 58.41 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 275.00 5.04 0.56 51.31 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 1194.00 21.90 2.44 87.22 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 39.00 0.72 0.08 100.0 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 699.00 12.82 1.43 100.0 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 229.00 4.20 0.47 100.0 CTC1-214 protein coding temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 3186.00 3.09 6.52 72.38 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 728.00 0.71 1.49 99.32 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 2091.00 2.03 4.28 100.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 5044.00 4.89 10.32 55.86 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 1907.00 1.85 3.90 100.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 2748.00 2.66 5.62 100.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 682.00 0.66 1.40 100.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 4369.00 4.23 8.94 100.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 2117.00 2.05 4.33 100.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 9435.00 9.14 19.31 51.21 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 9145.00 8.86 18.72 100.0 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 19558.00 18.94 40.03 78.43 ENST00000651540 lncRNA temporal lobe (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 19955.00 1.03 40.84 100.0 MIRLET7A1HG-203 lncRNA temporal lobe (Tissue)