ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 106.00 0.01 0.22 100.0 C19orf48P-203 retained intron temporal lobe (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 9.00 0.00 0.02 100.0 C19orf48P-203 retained intron temporal lobe (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 1.00 50.00 0.00 100.0 ENST00000597420 lncRNA temporal lobe (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 98.00 2.05 0.20 100.0 RPS11-206 retained intron temporal lobe (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 3777.00 79.10 7.73 100.0 RPS11-206 retained intron temporal lobe (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 20370.00 66.07 41.69 67.86 CARMN-209 lncRNA temporal lobe (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 4904.00 29.95 10.04 100.0 ENST00000602478 lncRNA temporal lobe (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 973.00 26.73 1.99 100.0 SNORD114-21-201 snoRNA temporal lobe (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 1048.00 28.79 2.14 100.0 SNORD114-21-201 snoRNA temporal lobe (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 118.00 0.19 0.24 100.0 SNORD115-40-201 snoRNA temporal lobe (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 44318.00 97.95 90.71 100.0 MIR98-201 miRNA temporal lobe (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 17025.00 91.64 34.85 100.0 SNORD113-5-201 snoRNA temporal lobe (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 13689.00 83.54 28.02 100.0 MIR15A-201 miRNA temporal lobe (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 686.00 82.55 1.40 100.0 MIR376C-201 miRNA temporal lobe (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 1059.00 55.56 2.17 100.0 SNHG21-206 retained intron temporal lobe (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 85.00 7.25 0.17 100.0 SNORD11B-201 snoRNA temporal lobe (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 2592.00 60.65 5.31 100.0 SNORD91B-201 snoRNA temporal lobe (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 100.00 67.11 0.20 100.0 MIR219A2HG-201 lncRNA temporal lobe (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 16169.00 55.65 33.09 76.54 SNORD91A-201 snoRNA temporal lobe (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 13837.00 46.90 28.32 97.09 MIR486-1-201 miRNA temporal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 17264.00 12.97 35.33 68.62 NOP56-219 retained intron temporal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 1912.00 1.44 3.91 100.0 NOP56-219 retained intron temporal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 1060.00 0.80 2.17 100.0 NOP56-219 retained intron temporal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 77312.00 58.07 158.24 83.16 NOP56-219 retained intron temporal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 313.00 6.83 0.64 40.92 RNA5-8SN2-201 rRNA temporal lobe (Tissue)