ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 96542.00 45.49 197.60 100.0 SNHG14-220 retained intron temporal lobe (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 1242.00 0.59 2.54 100.0 SNHG14-220 retained intron temporal lobe (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 101879.00 48.00 208.52 100.0 SNHG14-220 retained intron temporal lobe (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 2837.00 99.23 5.81 100.0 TEKT4P2-201 transcribed unprocessed pseudogene temporal lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 167004.00 85.70 341.81 98.61 RPL4-202 retained intron temporal lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 868.00 0.45 1.78 100.0 RPL4-202 retained intron temporal lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 441.00 0.23 0.90 100.0 RPL4-202 retained intron temporal lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 52.00 0.03 0.11 100.0 RPL4-202 retained intron temporal lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 1702.00 0.87 3.48 100.0 RPL4-202 retained intron temporal lobe (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 4.00 0.01 0.01 100.0 ENST00000563103 lncRNA temporal lobe (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 660.00 2.96 1.35 100.0 RPL4-207 retained intron temporal lobe (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 8723.00 39.11 17.85 100.0 RPL4-207 retained intron temporal lobe (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 1544.00 7.50 3.16 71.32 ENST00000565336 lncRNA temporal lobe (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 15388.00 74.77 31.50 92.91 ENST00000565336 lncRNA temporal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 1045.00 0.19 2.14 100.0 RBMX-210 retained intron temporal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 4761.00 0.85 9.74 100.0 RBMX-210 retained intron temporal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 2727.00 0.48 5.58 100.0 RBMX-210 retained intron temporal lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 468832.00 83.23 959.58 88.58 RBMX-210 retained intron temporal lobe (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 6066.00 49.11 12.42 100.0 RPL4-214 retained intron temporal lobe (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 162.00 1.31 0.33 100.0 RPL4-214 retained intron temporal lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 1357.00 1.11 2.78 100.0 POLG-DT-202 lncRNA temporal lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 25523.97 20.95 52.24 27.78 POLG-DT-202 lncRNA temporal lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 62473.20 51.28 127.87 65.21 POLG-DT-202 lncRNA temporal lobe (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 6425.00 62.62 13.15 100.0 ENST00000570843 lncRNA temporal lobe (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 17667.00 74.18 36.16 100.0 MIR497HG-207 lncRNA temporal lobe (Tissue)