ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 790.00 2.35 2.55 100.0 LINC02739-203 lncRNA skeletal muscle tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 690.00 2.05 2.23 81.18 LINC02739-203 lncRNA skeletal muscle tissue (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 194.00 93.27 0.63 100.0 MIR124-1HG-216 lncRNA skeletal muscle tissue (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 375.00 25.39 1.21 100.0 SNHG10-212 lncRNA skeletal muscle tissue (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 28979.67 43.45 93.53 45.79 SNHG19-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 34139.72 51.19 110.19 64.19 SNHG19-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 6.53 0.01 0.02 81.58 SNHG19-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 0.72 0.00 0.00 72.05 SNHG19-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 1351.00 15.27 4.36 100.0 MIR222HG-206 lncRNA skeletal muscle tissue (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 5265.00 59.50 16.99 81.15 MIR222HG-206 lncRNA skeletal muscle tissue (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 55.00 0.62 0.18 100.0 MIR222HG-206 lncRNA skeletal muscle tissue (Tissue)
ENST00000688371.3 ENST00000688371.3_313_335_+ 313–335 2.00 7.41 0.01 100.0 MIR302CHG-205 lncRNA skeletal muscle tissue (Tissue)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 0.95 3.50 0.00 31.5 MIR302CHG-205 lncRNA skeletal muscle tissue (Tissue)
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 2.28 8.44 0.01 76.0 MIR302CHG-205 lncRNA skeletal muscle tissue (Tissue)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 4.00 14.81 0.01 100.0 MIR302CHG-205 lncRNA skeletal muscle tissue (Tissue)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 3.00 11.11 0.01 100.0 MIR302CHG-205 lncRNA skeletal muscle tissue (Tissue)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 12.00 44.44 0.04 92.31 MIR302CHG-205 lncRNA skeletal muscle tissue (Tissue)
ENST00000688371.3 ENST00000688371.3_458_481_+ 458–481 1.00 3.70 0.00 10.0 MIR302CHG-205 lncRNA skeletal muscle tissue (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 3.00 1.42 0.01 100.0 RPSA-216 retained intron skeletal muscle tissue (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 2056.00 1.55 6.64 82.94 MIR99AHG-370 lncRNA skeletal muscle tissue (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 127560.00 95.97 411.71 99.23 MIR99AHG-370 lncRNA skeletal muscle tissue (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 685.00 95.80 2.21 100.0 HPS4-237 retained intron skeletal muscle tissue (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 8775.00 83.60 28.32 100.0 MEG8-253 lncRNA skeletal muscle tissue (Tissue)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 10998.00 38.53 35.50 100.0 MEG9-206 lncRNA skeletal muscle tissue (Tissue)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 3888.00 13.62 12.55 100.0 MEG9-206 lncRNA skeletal muscle tissue (Tissue)