ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 926.00 0.78 2.99 100.0 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 37602.28 31.59 121.36 44.31 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 69.00 0.06 0.22 100.0 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 383.00 0.32 1.24 100.0 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 51092.77 42.93 164.91 56.81 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 11739.00 9.86 37.89 91.2 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 43.00 0.04 0.14 100.0 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 2959.00 2.49 9.55 100.0 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 27.00 0.02 0.09 100.0 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 2345.00 1.97 7.57 97.22 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 278.00 3.91 0.90 72.02 SNHG14-323 lncRNA skeletal muscle tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 60239.00 1.51 194.43 91.26 MEG8-251 lncRNA skeletal muscle tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 13033.00 0.33 42.06 47.38 MEG8-251 lncRNA skeletal muscle tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 3762349.00 94.01 12143.24 98.73 MEG8-251 lncRNA skeletal muscle tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 18908.00 0.47 61.03 66.3 MEG8-251 lncRNA skeletal muscle tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 12163.00 0.30 39.26 100.0 MEG8-251 lncRNA skeletal muscle tissue (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 8390.00 58.77 27.08 85.01 SNHG14-336 lncRNA skeletal muscle tissue (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 4919.00 34.45 15.88 60.06 SNHG14-336 lncRNA skeletal muscle tissue (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 2171.00 53.99 7.01 93.3 SNHG14-341 lncRNA skeletal muscle tissue (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 1268.00 38.71 4.09 100.0 NCL-211 retained intron skeletal muscle tissue (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 498.00 14.00 1.61 100.0 FMN2-209 protein coding CDS not defined skeletal muscle tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 235.00 0.70 0.76 100.0 LINC02739-203 lncRNA skeletal muscle tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 160.00 0.48 0.52 18.82 LINC02739-203 lncRNA skeletal muscle tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 4540.00 13.51 14.65 100.0 LINC02739-203 lncRNA skeletal muscle tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 13247.00 39.42 42.76 100.0 LINC02739-203 lncRNA skeletal muscle tissue (Tissue)