ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 15710.00 73.71 50.71 100.0 GNL3-211 retained intron skeletal muscle tissue (Tissue)
ENST00000497519.1 ENST00000497519.1_675_769_+ 675–769 2.00 0.03 0.01 100.0 RPL5-205 retained intron skeletal muscle tissue (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 5780.00 76.29 18.66 100.0 RPL5-205 retained intron skeletal muscle tissue (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 469.00 6.19 1.51 100.0 RPL5-205 retained intron skeletal muscle tissue (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 39.00 1.72 0.13 100.0 ZBED9-AS1-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 11831.00 90.22 38.19 100.0 RPS3A-206 retained intron skeletal muscle tissue (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 25792.00 93.60 83.25 100.0 COX7C-203 protein coding skeletal muscle tissue (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 526.00 0.29 1.70 100.0 RACK1-229 protein coding skeletal muscle tissue (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 27867.55 15.50 89.94 23.77 RACK1-229 protein coding skeletal muscle tissue (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 142602.91 79.32 460.26 84.9 RACK1-229 protein coding skeletal muscle tissue (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 2987.00 1.66 9.64 84.62 RACK1-229 protein coding skeletal muscle tissue (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 189657.00 81.64 612.13 95.03 RACK1-230 retained intron skeletal muscle tissue (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 38289.00 16.48 123.58 45.86 RACK1-230 retained intron skeletal muscle tissue (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 2.00 3.51 0.01 100.0 RNA5SP486-201 rRNA pseudogene skeletal muscle tissue (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 778.00 81.64 2.51 100.0 SCARNA5-201 scaRNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 672.00 0.29 2.17 100.0 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 160241.00 68.18 517.19 98.48 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 2314.00 0.98 7.47 93.23 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 324.00 0.14 1.05 100.0 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 3834.00 1.63 12.37 51.34 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 9764.00 4.15 31.51 85.36 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 1886.00 0.80 6.09 100.0 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 8645.00 3.68 27.90 77.8 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 760.00 0.32 2.45 100.0 RNY4-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 283.00 0.12 0.91 66.28 RNY4-201 misc RNA skeletal muscle tissue (Tissue)