ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 2015.00 0.31 6.50 48.68 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 619.00 0.10 2.00 28.56 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 2487.00 0.38 8.03 81.38 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 696.00 0.11 2.25 100.0 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 535.00 0.08 1.73 56.61 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 5943.00 0.92 19.18 73.52 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 1231.00 0.19 3.97 56.81 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 60.00 0.01 0.19 55.56 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 4249.00 0.66 13.71 85.75 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 68171.00 10.54 220.03 76.63 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 327.00 0.05 1.06 100.0 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 542899.00 83.92 1752.24 99.15 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 1684.00 0.26 5.44 100.0 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 3.00 0.00 0.01 100.0 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 197.00 0.03 0.64 100.0 EIF4A2-219 retained intron skeletal muscle tissue (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 32703.00 96.00 105.55 100.0 RPS8-207 protein coding CDS not defined skeletal muscle tissue (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 154.00 10.82 0.50 100.0 RPL7A-206 protein coding CDS not defined skeletal muscle tissue (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 368.00 25.86 1.19 100.0 RPL7A-206 protein coding CDS not defined skeletal muscle tissue (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 272.00 19.11 0.88 100.0 RPL7A-206 protein coding CDS not defined skeletal muscle tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 535352.00 82.51 1727.88 99.18 RPL21-209 retained intron skeletal muscle tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 1871.00 0.29 6.04 100.0 RPL21-209 retained intron skeletal muscle tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 1769.00 0.27 5.71 100.0 RPL21-209 retained intron skeletal muscle tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 2071.00 0.32 6.68 100.0 RPL21-209 retained intron skeletal muscle tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 100803.00 15.54 325.35 99.53 RPL21-209 retained intron skeletal muscle tissue (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 1192.00 16.93 3.85 100.0 GABRE-209 retained intron skeletal muscle tissue (Tissue)