ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 787.00 0.96 2.54 100.0 SNORD19C-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 77571.00 94.40 250.37 98.4 SNORD19C-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 3004.00 2.14 9.70 100.0 SNORD12B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 45.00 0.03 0.15 100.0 SNORD12B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 131486.00 93.70 424.38 98.95 SNORD12B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 5418.00 47.53 17.49 100.0 Y_RNA.609-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 436.00 32.13 1.41 100.0 Y_RNA.612-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 455.00 1.31 1.47 100.0 SNORD71-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 678.00 1.96 2.19 100.0 SNORD71-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 32074.00 92.56 103.52 99.22 SNORD71-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 2518.00 15.24 8.13 59.65 MIR194-2HG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 12747.00 77.17 41.14 91.56 MIR194-2HG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 3.00 0.05 0.01 100.0 LINC01783-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 190.00 95.96 0.61 100.0 RPS7P15-201 processed pseudogene skeletal muscle tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 909.00 10.64 2.93 100.0 SNORD62B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 1725.00 20.20 5.57 100.0 SNORD62B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 65.00 0.76 0.21 100.0 SNORD62B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 297.00 3.48 0.96 100.0 SNORD62B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 2113.00 24.74 6.82 93.45 SNORD62B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 55.00 94.83 0.18 100.0 MRPL32-203 nonsense mediated decay skeletal muscle tissue (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 702.00 91.64 2.27 100.0 ENST00000436739 lncRNA skeletal muscle tissue (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 1446.00 12.56 4.67 63.14 TMEM107-204 protein coding skeletal muscle tissue (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 783.00 6.80 2.53 100.0 TMEM107-204 protein coding skeletal muscle tissue (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 87.00 0.76 0.28 100.0 TMEM107-204 protein coding skeletal muscle tissue (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 656.00 5.70 2.12 80.1 TMEM107-204 protein coding skeletal muscle tissue (Tissue)