ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 827.00 42.41 2.04 100.0 SNORD14C-201 snoRNA skin of body (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 94.00 51.93 0.23 100.0 SNORD115-44-201 snoRNA skin of body (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 29.00 3.00 0.07 100.0 RNA5SP77-201 rRNA pseudogene skin of body (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 93132.00 55.07 229.43 99.03 SNORD114-22-201 snoRNA skin of body (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 70670.00 41.79 174.09 100.0 SNORD114-22-201 snoRNA skin of body (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 24494.00 82.49 60.34 100.0 SNORD6-201 snoRNA skin of body (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 2048.00 6.90 5.05 100.0 SNORD6-201 snoRNA skin of body (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 1201.00 13.91 2.96 100.0 RNY3-201 misc RNA skin of body (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 6732.00 3.77 16.58 90.36 SNORD82-201 snoRNA skin of body (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 13518.38 7.57 33.30 48.21 SNORD82-201 snoRNA skin of body (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 13905.25 7.79 34.26 49.59 SNORD82-201 snoRNA skin of body (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 768.00 0.43 1.89 100.0 SNORD82-201 snoRNA skin of body (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 424.00 0.24 1.04 100.0 SNORD82-201 snoRNA skin of body (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 128352.00 71.92 316.19 97.98 SNORD82-201 snoRNA skin of body (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 645.00 0.36 1.59 100.0 SNORD82-201 snoRNA skin of body (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 26153.00 93.33 64.43 95.53 MIR146B-201 miRNA skin of body (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 199.00 41.29 0.49 100.0 SNHG20-201 lncRNA skin of body (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 525.00 27.44 1.29 100.0 ATP5MK-205 protein coding skin of body (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 274.00 14.32 0.67 100.0 ATP5MK-205 protein coding skin of body (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 115.00 18.58 0.28 100.0 LINC01556-201 lncRNA skin of body (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 72.00 55.38 0.18 100.0 ATAD3A-202 protein coding skin of body (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 7886.00 52.17 19.43 72.0 TMC5-202 protein coding skin of body (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 63.00 80.77 0.16 100.0 ZMYM2-203 protein coding skin of body (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 1050.00 12.40 2.59 100.0 RNVU1-7-201 snRNA skin of body (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 1668.00 24.16 4.11 100.0 SNORD24-201 snoRNA skin of body (Tissue)