ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 1131.00 0.07 2.79 60.16 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 4932.00 39.26 12.15 83.35 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 693.00 82.99 1.71 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 188.00 12.07 0.46 55.29 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 463.00 84.49 1.14 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 1602.00 1.92 3.95 78.03 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 451.00 0.54 1.11 21.97 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 39163.00 46.95 96.48 85.56 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 5730.06 17.00 14.12 29.4 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 1263.00 3.75 3.11 68.83 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 20299.53 60.24 50.01 79.13 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 242306.00 80.27 596.91 85.58 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 123.00 1.19 0.30 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 13071.00 32.53 32.20 85.97 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 124.00 0.01 0.31 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 329.00 0.15 0.81 72.31 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 115.00 11.64 0.28 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 675.00 11.36 1.66 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 1228144.00 97.89 3025.50 99.9 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 3132.00 8.64 7.72 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 12407.00 34.24 30.56 77.89 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 1878.00 46.40 4.63 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 182.00 18.06 0.45 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 988.00 10.04 2.43 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 75639.00 93.91 186.33 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA skin of body (Tissue)