ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 1176.00 3.25 2.90 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 23.00 0.00 0.06 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 180.00 0.01 0.44 4.48 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 5458.00 44.81 13.45 92.52 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 1304.00 10.71 3.21 19.28 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 1338.00 15.03 3.30 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 131444.00 58.47 323.81 91.16 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 502.00 0.22 1.24 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 741.00 19.24 1.83 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 541.00 6.57 1.33 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 245.00 1.13 0.60 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 250.00 0.75 0.62 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 1086.00 3.25 2.68 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 537.00 1.61 1.32 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 513.00 1.53 1.26 79.91 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 188.00 0.56 0.46 52.51 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 218.00 0.65 0.54 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 7600.00 18.89 18.72 36.77 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 6375.00 15.85 15.70 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 4584.00 12.04 11.29 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 730.00 1.04 1.80 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 2.00 0.00 0.00 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 503.00 0.71 1.24 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 41933.00 59.57 103.30 72.81 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 157.00 0.22 0.39 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA skin of body (Tissue)