ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 9591.00 2.85 23.63 100.0 MIR17HG-214 lncRNA skin of body (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 170.00 0.05 0.42 100.0 MIR17HG-214 lncRNA skin of body (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 3001.00 0.89 7.39 100.0 MIR17HG-214 lncRNA skin of body (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 2075.00 0.62 5.11 100.0 MIR17HG-214 lncRNA skin of body (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 3077.00 0.62 7.58 100.0 SNHG32-223 lncRNA skin of body (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 2926.00 0.59 7.21 100.0 SNHG32-223 lncRNA skin of body (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 906.00 0.18 2.23 100.0 SNHG32-223 lncRNA skin of body (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 3945.00 0.80 9.72 57.8 SNHG32-223 lncRNA skin of body (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 470973.00 95.48 1160.23 100.0 SNHG32-223 lncRNA skin of body (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 74153.00 80.65 182.67 98.14 SNHG32-227 lncRNA skin of body (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 1694.00 1.84 4.17 100.0 SNHG32-227 lncRNA skin of body (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 2099.00 2.28 5.17 100.0 SNHG32-227 lncRNA skin of body (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 3141.00 3.42 7.74 100.0 SNHG32-227 lncRNA skin of body (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 432.00 80.60 1.06 100.0 B4GALT1-203 nonsense mediated decay skin of body (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 762.00 1.11 1.88 100.0 ENST00000722183 lncRNA skin of body (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 30392.00 44.23 74.87 76.87 ENST00000722183 lncRNA skin of body (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 11789.00 17.16 29.04 100.0 ENST00000722183 lncRNA skin of body (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 156.00 79.19 0.38 100.0 MIR34BHG-202 lncRNA skin of body (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 3038.00 76.68 7.48 84.51 THBS3-AS1-228 lncRNA skin of body (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 10339.00 64.08 25.47 100.0 MIR200CHG-202 lncRNA skin of body (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 2230.00 13.82 5.49 100.0 MIR200CHG-202 lncRNA skin of body (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 220.00 2.11 0.54 100.0 SNHG16-266 lncRNA skin of body (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 1756.00 16.81 4.33 100.0 SNHG16-266 lncRNA skin of body (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 923.00 8.84 2.27 100.0 SNHG16-266 lncRNA skin of body (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 557.00 5.33 1.37 100.0 SNHG16-266 lncRNA skin of body (Tissue)