ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 47527.00 28.89 117.08 81.13 ENST00000651540 lncRNA skin of body (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 29979.00 1.97 73.85 100.0 MIRLET7A1HG-203 lncRNA skin of body (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 34293.00 90.68 84.48 100.0 MEG8-225 lncRNA skin of body (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 269395.00 68.52 663.65 100.0 SNHG29-232 lncRNA skin of body (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 174.00 0.04 0.43 100.0 SNHG29-232 lncRNA skin of body (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 1160.00 0.30 2.86 100.0 SNHG29-232 lncRNA skin of body (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 13470.00 3.43 33.18 100.0 SNHG29-232 lncRNA skin of body (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 36937.00 9.39 90.99 100.0 SNHG29-232 lncRNA skin of body (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 57179.00 14.54 140.86 100.0 SNHG29-232 lncRNA skin of body (Tissue)
ENST00000654356.2 ENST00000654356.2_463_540_+ 463–540 1.00 0.00 0.00 100.0 SNHG29-232 lncRNA skin of body (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 201.00 0.37 0.50 100.0 SNHG14-234 lncRNA skin of body (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 19390.00 35.60 47.77 95.15 SNHG14-234 lncRNA skin of body (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 803.00 1.47 1.98 100.0 SNHG14-234 lncRNA skin of body (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 2293.00 4.21 5.65 100.0 SNHG14-234 lncRNA skin of body (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 7223.00 13.26 17.79 100.0 SNHG14-234 lncRNA skin of body (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 3382.00 6.21 8.33 95.7 SNHG14-234 lncRNA skin of body (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 212.00 2.69 0.52 42.83 ENST00000655317 lncRNA skin of body (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 1325.00 16.84 3.26 100.0 ENST00000655317 lncRNA skin of body (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 529.00 6.72 1.30 64.99 ENST00000655317 lncRNA skin of body (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 333.00 4.23 0.82 100.0 ENST00000655317 lncRNA skin of body (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 1196.00 1.75 2.95 31.03 LINC01962-202 lncRNA skin of body (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 59455.00 87.18 146.47 100.0 LINC01962-202 lncRNA skin of body (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 1098.00 1.61 2.70 100.0 LINC01962-202 lncRNA skin of body (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 7424.00 38.82 18.29 93.93 SNHG14-241 lncRNA skin of body (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 282687.00 97.30 696.39 100.0 MEG8-228 lncRNA skin of body (Tissue)