ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 79561.00 63.78 196.00 81.89 NOP56-219 retained intron skin of body (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 550.00 7.91 1.35 41.54 RNA5-8SN2-201 rRNA skin of body (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 22.16 0.32 0.05 38.21 RNA5-8SN2-201 rRNA skin of body (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 403.00 5.79 0.99 100.0 RNA5-8SN2-201 rRNA skin of body (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 139.00 2.00 0.34 100.0 RNA5-8SN2-201 rRNA skin of body (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 1253.00 18.02 3.09 69.5 RNA5-8SN2-201 rRNA skin of body (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 36.93 0.53 0.09 63.68 RNA5-8SN2-201 rRNA skin of body (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 4.00 100.00 0.01 100.0 MIR7974-201 miRNA skin of body (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 252.00 16.58 0.62 100.0 MIR376A1-201 miRNA skin of body (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 714.00 46.97 1.76 100.0 MIR376A1-201 miRNA skin of body (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 2915.00 0.83 7.18 100.0 U2.3-201 snRNA skin of body (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 1642.40 0.47 4.05 34.86 U2.3-201 snRNA skin of body (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 198267.00 56.33 488.43 98.49 U2.3-201 snRNA skin of body (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 8.00 0.00 0.02 100.0 U2.3-201 snRNA skin of body (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 49393.00 14.03 121.68 78.32 U2.3-201 snRNA skin of body (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 5414.00 1.54 13.34 48.97 U2.3-201 snRNA skin of body (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 3948.00 1.12 9.73 57.39 U2.3-201 snRNA skin of body (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 3023.02 0.86 7.45 64.17 U2.3-201 snRNA skin of body (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 208.00 0.06 0.51 100.0 U2.3-201 snRNA skin of body (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 16.00 0.00 0.04 100.0 U2.3-201 snRNA skin of body (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 78.00 0.02 0.19 100.0 U2.3-201 snRNA skin of body (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 520.00 0.15 1.28 100.0 U2.3-201 snRNA skin of body (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 20068.07 5.70 49.44 46.67 U2.3-201 snRNA skin of body (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 13668.04 3.88 33.67 46.21 U2.3-201 snRNA skin of body (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 3700.00 1.08 9.11 100.0 U2.6-201 snRNA skin of body (Tissue)