ENCFF001RLZ

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 131.00 28.85 0.12 88.51 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_458_490_+ 458–490 1.00 0.22 0.00 100.0 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_458_481_+ 458–481 33.00 7.27 0.03 40.74 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 8.00 3.81 0.01 100.0 RPSA-216 retained intron heart (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 1809.00 2.26 1.71 84.22 MIR99AHG-370 lncRNA heart (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 75868.00 94.77 71.67 98.94 MIR99AHG-370 lncRNA heart (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 1550.00 93.94 1.46 100.0 HPS4-237 retained intron heart (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 2453.00 88.17 2.32 100.0 MEG8-253 lncRNA heart (Tissue)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 455.00 20.42 0.43 100.0 MEG9-206 lncRNA heart (Tissue)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 239.00 10.73 0.23 100.0 MEG9-206 lncRNA heart (Tissue)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 318.00 14.27 0.30 100.0 MEG9-206 lncRNA heart (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 1535.00 13.20 1.45 100.0 DNAJC5-203 nonsense mediated decay heart (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 1314.00 21.15 1.24 100.0 ENST00000707189 TEC heart (Tissue)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 281.00 0.05 0.27 100.0 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 264732.08 47.82 250.09 51.67 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 225.00 0.04 0.21 100.0 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 452.00 0.08 0.43 100.0 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 264364.55 47.75 249.74 50.62 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 5984.00 1.08 5.65 100.0 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 247.00 0.04 0.23 100.0 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 5992.00 1.08 5.66 100.0 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 4770.00 0.86 4.51 100.0 MIR17HG-214 lncRNA heart (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 18654.00 4.08 17.62 100.0 SNHG32-223 lncRNA heart (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 9607.00 2.10 9.08 100.0 SNHG32-223 lncRNA heart (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 485.00 0.11 0.46 100.0 SNHG32-223 lncRNA heart (Tissue)