ENCFF001RLZ

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 49.00 1.15 0.05 100.0 NCL-211 retained intron heart (Tissue)
ENST00000677786.1 ENST00000677786.1_3513_3605_+ 3513–3605 1.00 0.17 0.00 100.0 NCL-216 retained intron heart (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 1272.00 27.46 1.20 100.0 FMN2-209 protein coding CDS not defined heart (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 20.00 0.09 0.02 100.0 LINC02739-203 lncRNA heart (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 1189.00 5.20 1.12 48.79 LINC02739-203 lncRNA heart (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 3299.00 14.42 3.12 100.0 LINC02739-203 lncRNA heart (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 4415.00 19.29 4.17 100.0 LINC02739-203 lncRNA heart (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 3426.00 14.97 3.24 100.0 LINC02739-203 lncRNA heart (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 1248.00 5.45 1.18 51.21 LINC02739-203 lncRNA heart (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 314.00 89.97 0.30 100.0 MIR124-1HG-216 lncRNA heart (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 714.00 20.27 0.67 100.0 SNHG10-212 lncRNA heart (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 110386.31 54.89 104.28 57.08 SNHG19-202 lncRNA heart (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 83753.12 41.65 79.12 56.96 SNHG19-202 lncRNA heart (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 18.65 0.01 0.02 81.08 SNHG19-202 lncRNA heart (Tissue)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 4.32 0.00 0.00 72.05 SNHG19-202 lncRNA heart (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 4970.00 22.22 4.70 100.0 MIR222HG-206 lncRNA heart (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 12609.00 56.37 11.91 85.72 MIR222HG-206 lncRNA heart (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 566.00 2.53 0.53 100.0 MIR222HG-206 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_458_485_+ 458–485 4.00 0.88 0.00 100.0 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_313_335_+ 313–335 4.00 0.88 0.00 25.0 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 35.91 7.91 0.03 55.25 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_313_333_+ 313–333 12.00 2.64 0.01 100.0 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 25.08 5.52 0.02 49.18 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 74.00 16.30 0.07 100.0 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 76.00 16.74 0.07 100.0 MIR302CHG-205 lncRNA heart (Tissue)