ENCFF001RLZ

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 32783.00 1.01 30.97 83.6 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 68037.00 2.09 64.27 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 66120.00 2.03 62.46 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 108981.00 3.35 102.95 97.56 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 304494.00 9.35 287.65 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 1246.00 0.04 1.18 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 8561.00 0.26 8.09 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1641_1722_+ 1641–1722 2.00 0.00 0.00 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 1651.00 0.05 1.56 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 2138.00 18.98 2.02 100.0 FTX-219 lncRNA heart (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 4874.00 43.26 4.60 86.9 FTX-219 lncRNA heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 565.00 6.27 0.53 67.91 CTC1-214 protein coding heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 303.00 3.36 0.29 25.38 CTC1-214 protein coding heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 664.00 7.37 0.63 39.83 CTC1-214 protein coding heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 267.00 2.96 0.25 32.09 CTC1-214 protein coding heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 1831.00 20.32 1.73 88.93 CTC1-214 protein coding heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 178.00 1.98 0.17 100.0 CTC1-214 protein coding heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 158.00 1.75 0.15 100.0 CTC1-214 protein coding heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 1864.00 20.69 1.76 100.0 CTC1-214 protein coding heart (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 306.00 0.60 0.29 62.07 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 1095.00 2.13 1.03 98.92 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 3053.00 5.95 2.88 100.0 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1420.00 2.77 1.34 62.28 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 847.00 1.65 0.80 100.0 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 700.00 1.36 0.66 100.0 ENST00000651540 lncRNA heart (Tissue)