ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 9289.00 2.77 26.50 100.0 SNHG14-306 lncRNA diencephalon (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 108.00 1.66 0.31 100.0 ENST00000666735 lncRNA diencephalon (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 2106.00 32.30 6.01 100.0 ENST00000666735 lncRNA diencephalon (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 36325.00 88.93 103.63 100.0 MEG8-242 lncRNA diencephalon (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 25939.53 25.09 74.00 31.53 SNHG14-312 lncRNA diencephalon (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 58008.14 56.10 165.49 70.51 SNHG14-312 lncRNA diencephalon (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 3115.00 3.01 8.89 100.0 SNHG14-312 lncRNA diencephalon (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 1033.00 0.43 2.95 100.0 MEG8-244 lncRNA diencephalon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 1313.00 0.54 3.75 100.0 MEG8-244 lncRNA diencephalon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 236562.00 97.71 674.89 99.98 MEG8-244 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 288.00 0.01 0.82 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 5.00 0.00 0.01 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 3643.00 0.19 10.39 99.32 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 265.64 0.01 0.76 42.71 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 2645.00 0.14 7.55 89.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 1286787.00 66.18 3671.08 99.02 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 528.00 0.03 1.51 68.39 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 69494.00 3.57 198.26 99.59 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 3934.00 0.20 11.22 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 152789.00 7.86 435.89 99.77 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 132.00 0.01 0.38 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 1054.00 0.05 3.01 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 777.00 0.04 2.22 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 1476.00 0.08 4.21 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 128.00 0.01 0.37 100.0 SNHG1-248 lncRNA diencephalon (Tissue)