ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 3180.00 42.26 5.83 100.0 SNORD24-201 snoRNA spinal cord (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 1.00 0.07 0.00 100.0 Y_RNA.389-201 misc RNA spinal cord (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 1133.00 1.51 2.08 100.0 SNORD101-201 snoRNA spinal cord (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 1272.00 1.69 2.33 100.0 SNORD101-201 snoRNA spinal cord (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 5300.00 7.06 9.72 92.43 SNORD101-201 snoRNA spinal cord (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 59434.00 79.13 108.98 97.46 SNORD101-201 snoRNA spinal cord (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 33763.00 93.78 61.91 100.0 SNORD37-201 snoRNA spinal cord (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 192962.00 84.27 353.83 97.85 SNORD59A-201 snoRNA spinal cord (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 123.00 3.93 0.23 100.0 SNORA7B-201 snoRNA spinal cord (Tissue)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 7280.00 81.11 13.35 100.0 SNORD14D-201 snoRNA spinal cord (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 4.00 2.19 0.01 100.0 Y_RNA.555-201 misc RNA spinal cord (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 55284.00 82.36 101.37 85.14 MIR25-201 miRNA spinal cord (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 31458.00 91.68 57.68 97.88 MIR99B-201 miRNA spinal cord (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 39529.00 46.80 72.48 70.45 MIR23B-201 miRNA spinal cord (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 41831.00 49.52 76.70 73.49 MIR23B-201 miRNA spinal cord (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 85.00 42.08 0.16 100.0 MIR203A-201 miRNA spinal cord (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 36367.00 16.86 66.68 100.0 MIR199B-201 miRNA spinal cord (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 162055.00 75.15 297.15 93.6 MIR199B-201 miRNA spinal cord (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 18862.00 94.44 34.59 100.0 MIR30B-201 miRNA spinal cord (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 3784.00 92.32 6.94 100.0 MIR181D-201 miRNA spinal cord (Tissue)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 43.00 58.11 0.08 100.0 MIR508-201 miRNA spinal cord (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 199.00 89.64 0.36 100.0 MIR215-201 miRNA spinal cord (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 14868.00 1.52 27.26 100.0 MIR181A2-201 miRNA spinal cord (Tissue)
ENST00000384872.3 ENST00000384872.3_53_74_+ 53–74 13.00 50.00 0.02 100.0 MIR206-201 miRNA spinal cord (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 211439.00 98.82 387.71 99.62 MIR191-201 miRNA spinal cord (Tissue)