ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 5634.00 81.76 10.33 86.74 MIR149-201 miRNA spinal cord (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 2674.00 6.37 4.90 100.0 MIR181C-201 miRNA spinal cord (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 35689.00 85.05 65.44 96.21 MIR181C-201 miRNA spinal cord (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 1231.00 85.49 2.26 100.0 MIR194-1-201 miRNA spinal cord (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 32025.00 84.69 58.72 87.36 MIR128-2-201 miRNA spinal cord (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 40768.00 83.66 74.75 91.19 MIR99A-201 miRNA spinal cord (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 167.00 0.42 0.31 100.0 MIR28-201 miRNA spinal cord (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 28950.00 73.04 53.08 94.11 MIR28-201 miRNA spinal cord (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 5810.00 14.66 10.65 73.12 MIR28-201 miRNA spinal cord (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 16849.00 68.37 30.90 100.0 MIR183-201 miRNA spinal cord (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 290.00 4.33 0.53 100.0 MIR145-201 miRNA spinal cord (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 5791.00 86.46 10.62 100.0 MIR145-201 miRNA spinal cord (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 52286.00 96.81 95.87 98.2 MIR186-201 miRNA spinal cord (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 69.00 85.19 0.13 100.0 MIR200B-201 miRNA spinal cord (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 11130.00 70.24 20.41 100.0 MIR218-1-201 miRNA spinal cord (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 103584.00 87.88 189.94 94.71 MIR181B2-201 miRNA spinal cord (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 498.00 55.46 0.91 100.0 MIR495-201 miRNA spinal cord (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 7848831.00 90.60 14392.11 91.16 MIR10B-201 miRNA spinal cord (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 1815.00 24.71 3.33 100.0 MIR130B-201 miRNA spinal cord (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 2322.94 31.62 4.26 53.51 MIR130B-201 miRNA spinal cord (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 2802.63 38.15 5.14 56.48 MIR130B-201 miRNA spinal cord (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 5988.00 3.24 10.98 100.0 MIR199A1-201 miRNA spinal cord (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 7089.00 80.98 13.00 100.0 MIR487B-201 miRNA spinal cord (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 22912.65 59.27 42.01 62.62 MIR93-201 miRNA spinal cord (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 14352.38 37.13 26.32 46.18 MIR93-201 miRNA spinal cord (Tissue)