ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 1232.00 5.48 2.26 100.0 SNORD104-201 snoRNA spinal cord (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1879.00 8.35 3.45 100.0 SNORD104-201 snoRNA spinal cord (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 83688.00 59.58 153.46 95.66 SNORD115-9-201 snoRNA spinal cord (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 9387.00 47.94 17.21 86.64 RNA5SP358-201 rRNA pseudogene spinal cord (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 77.00 1.03 0.14 74.04 RNA5SP145-201 rRNA pseudogene spinal cord (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 221.00 16.83 0.41 100.0 Y_RNA.105-201 misc RNA spinal cord (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 9804.00 37.95 17.98 100.0 RNY4P9-201 misc RNA spinal cord (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 6477.00 10.95 11.88 100.0 RNU5B-1-201 snRNA spinal cord (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 2936.00 4.96 5.38 100.0 RNU5B-1-201 snRNA spinal cord (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 2551.00 4.31 4.68 100.0 RNU5B-1-201 snRNA spinal cord (Tissue)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 6308.00 10.67 11.57 73.46 RNU5B-1-201 snRNA spinal cord (Tissue)
ENST00000363286.1 ENST00000363286.1_1_69_+ 1–69 374.00 0.63 0.69 100.0 RNU5B-1-201 snRNA spinal cord (Tissue)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 2710.00 4.58 4.97 100.0 RNU5B-1-201 snRNA spinal cord (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 143645.00 89.52 263.40 97.1 SNORD115-18-201 snoRNA spinal cord (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 27983.00 49.68 51.31 92.73 RNY4P27-201 misc RNA spinal cord (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 2167.00 3.85 3.97 49.69 RNY4P27-201 misc RNA spinal cord (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 5241.00 18.75 9.61 100.0 Y_RNA.136-201 misc RNA spinal cord (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 43864.00 46.13 80.43 100.0 SNORD115-41-201 snoRNA spinal cord (Tissue)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 9757.00 15.72 17.89 100.0 SNORD115-5-201 snoRNA spinal cord (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 11467.00 31.71 21.03 100.0 SNORD115-33-201 snoRNA spinal cord (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 22192.00 86.02 40.69 99.71 SNORD114-25-201 snoRNA spinal cord (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 45961.00 90.77 84.28 100.0 SNORD113-7-201 snoRNA spinal cord (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 8097.00 17.05 14.85 100.0 SNORD115-8-201 snoRNA spinal cord (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 1817.00 37.46 3.33 100.0 Y_RNA.181-201 misc RNA spinal cord (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 26573.00 34.25 48.73 100.0 SNORD115-16-201 snoRNA spinal cord (Tissue)