ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 1896.00 1.76 3.48 100.0 ENST00000722183 lncRNA spinal cord (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 56392.00 52.22 103.40 78.05 ENST00000722183 lncRNA spinal cord (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 11620.00 10.76 21.31 100.0 ENST00000722183 lncRNA spinal cord (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 1253.00 79.25 2.30 100.0 MIR34BHG-202 lncRNA spinal cord (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 76770.00 84.57 140.77 88.52 THBS3-AS1-228 lncRNA spinal cord (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 15.00 60.00 0.03 100.0 MIR200CHG-202 lncRNA spinal cord (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 3.00 12.00 0.01 100.0 MIR200CHG-202 lncRNA spinal cord (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 141.00 0.95 0.26 100.0 SNHG16-266 lncRNA spinal cord (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 3481.00 23.36 6.38 100.0 SNHG16-266 lncRNA spinal cord (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 1431.00 9.60 2.62 100.0 SNHG16-266 lncRNA spinal cord (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 963.00 6.46 1.77 100.0 SNHG16-266 lncRNA spinal cord (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 1170.00 52.87 2.15 100.0 MEG8-261 lncRNA spinal cord (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 1131.00 41.29 2.07 100.0 NR2F2-AS1-327 lncRNA spinal cord (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 153.00 1.79 0.28 29.25 ENST00000747675 lncRNA spinal cord (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 4047.00 47.22 7.42 100.0 ENST00000747675 lncRNA spinal cord (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 103.00 1.20 0.19 40.23 ENST00000747675 lncRNA spinal cord (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 267.00 3.12 0.49 63.57 ENST00000747675 lncRNA spinal cord (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 725.00 8.46 1.33 100.0 ENST00000747675 lncRNA spinal cord (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 9016.00 63.64 16.53 94.36 SNHG26-250 lncRNA spinal cord (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 2542.00 17.94 4.66 92.5 SNHG26-250 lncRNA spinal cord (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 44.00 3.20 0.08 100.0 LINC02422-207 lncRNA spinal cord (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 222.00 2.65 0.41 100.0 ENST00000753088 lncRNA spinal cord (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 1902.00 22.71 3.49 100.0 ENST00000753088 lncRNA spinal cord (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 2899.81 3.01 5.32 28.33 ENST00000756336 lncRNA spinal cord (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 258.00 0.27 0.47 100.0 ENST00000756336 lncRNA spinal cord (Tissue)