ENCFF001RLX

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 5539.00 1.78 10.16 100.0 ENST00000651540 lncRNA spinal cord (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 44435.00 14.30 81.48 52.85 ENST00000651540 lncRNA spinal cord (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 11735.00 3.78 21.52 100.0 ENST00000651540 lncRNA spinal cord (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 91701.00 29.50 168.15 80.03 ENST00000651540 lncRNA spinal cord (Tissue)
ENST00000651540.1 ENST00000651540.1_1_88_+ 1–88 5.00 0.00 0.01 100.0 ENST00000651540 lncRNA spinal cord (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 32748.00 1.57 60.05 100.0 MIRLET7A1HG-203 lncRNA spinal cord (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 26162.00 88.97 47.97 100.0 MEG8-225 lncRNA spinal cord (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 310710.00 77.96 569.74 100.0 SNHG29-232 lncRNA spinal cord (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 268.00 0.07 0.49 100.0 SNHG29-232 lncRNA spinal cord (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 1153.00 0.29 2.11 100.0 SNHG29-232 lncRNA spinal cord (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 9552.00 2.40 17.52 100.0 SNHG29-232 lncRNA spinal cord (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 16181.00 4.06 29.67 100.0 SNHG29-232 lncRNA spinal cord (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 46242.00 11.60 84.79 100.0 SNHG29-232 lncRNA spinal cord (Tissue)
ENST00000654356.2 ENST00000654356.2_463_540_+ 463–540 1.00 0.00 0.00 100.0 SNHG29-232 lncRNA spinal cord (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 684.00 0.23 1.25 100.0 SNHG14-234 lncRNA spinal cord (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 107866.00 36.74 197.79 95.62 SNHG14-234 lncRNA spinal cord (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 2545.00 0.87 4.67 100.0 SNHG14-234 lncRNA spinal cord (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 12268.00 4.18 22.50 100.0 SNHG14-234 lncRNA spinal cord (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 46105.00 15.70 84.54 100.0 SNHG14-234 lncRNA spinal cord (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 22109.00 7.53 40.54 95.56 SNHG14-234 lncRNA spinal cord (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 5560.00 4.10 10.20 62.31 ENST00000655317 lncRNA spinal cord (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 26688.00 19.69 48.94 100.0 ENST00000655317 lncRNA spinal cord (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 5757.00 4.25 10.56 42.95 ENST00000655317 lncRNA spinal cord (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 7536.00 5.56 13.82 100.0 ENST00000655317 lncRNA spinal cord (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 20100.00 13.35 36.86 94.07 LINC01962-202 lncRNA spinal cord (Tissue)