ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 84.00 25.23 0.27 100.0 ENST00000786284 lncRNA occipital lobe (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 5.00 1.50 0.02 17.24 ENST00000786284 lncRNA occipital lobe (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 4615.00 62.70 14.96 73.65 ENST00000788343 lncRNA occipital lobe (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 1866.26 30.20 6.05 46.81 ENST00000797550 lncRNA occipital lobe (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 741.61 12.00 2.40 18.6 ENST00000797550 lncRNA occipital lobe (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 104.00 1.68 0.34 38.24 ENST00000797550 lncRNA occipital lobe (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 762471.00 83.14 2470.99 92.74 MIR181A1HG-212 lncRNA occipital lobe (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 14133.00 1.54 45.80 100.0 MIR181A1HG-212 lncRNA occipital lobe (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 26.00 4.58 0.08 100.0 C19orf48P-218 lncRNA occipital lobe (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 263.00 46.30 0.85 100.0 C19orf48P-218 lncRNA occipital lobe (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 1093.00 86.40 3.54 93.26 SNHG18-220 lncRNA occipital lobe (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 71.00 20.29 0.23 100.0 ENST00000817026 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 479.29 2.28 1.55 44.17 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 1031.00 4.91 3.34 100.0 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 724.36 3.45 2.35 52.45 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 139.00 0.66 0.45 100.0 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 3701.00 17.62 11.99 99.52 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 1209.58 5.76 3.92 53.12 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 1083.76 5.16 3.51 41.76 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 1235.00 5.88 4.00 81.25 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 1564.54 7.45 5.07 53.62 ENST00000823279 lncRNA occipital lobe (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 1469.65 7.00 4.76 43.95 ENST00000823801 lncRNA occipital lobe (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 206.00 52.28 0.67 60.59 ENST00000827714 lncRNA occipital lobe (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 134.00 34.01 0.43 39.41 ENST00000827714 lncRNA occipital lobe (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 379.00 0.93 1.23 100.0 GAS5-377 lncRNA occipital lobe (Tissue)