ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 118.00 43.87 0.38 100.0 ENST00000770398 lncRNA occipital lobe (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 19.00 7.06 0.06 100.0 ENST00000770398 lncRNA occipital lobe (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 27.00 0.32 0.09 100.0 ENST00000771298 lncRNA occipital lobe (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 6.00 0.07 0.02 100.0 ENST00000771298 lncRNA occipital lobe (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 7403.00 88.34 23.99 96.36 ENST00000771298 lncRNA occipital lobe (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 14.00 0.17 0.05 100.0 ENST00000771298 lncRNA occipital lobe (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 636.00 56.68 2.06 100.0 ENST00000772672 lncRNA occipital lobe (Tissue)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 1.00 0.09 0.00 100.0 ENST00000772672 lncRNA occipital lobe (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 6.00 0.53 0.02 100.0 ENST00000772672 lncRNA occipital lobe (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 357.00 70.14 1.16 100.0 ENST00000773843 lncRNA occipital lobe (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 22.00 0.03 0.07 100.0 SNHG12-223 lncRNA occipital lobe (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 25690.00 33.36 83.26 93.33 SNHG12-223 lncRNA occipital lobe (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 50908.00 66.12 164.98 99.6 SNHG12-223 lncRNA occipital lobe (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 393.00 0.03 1.27 100.0 SNHG25-206 lncRNA occipital lobe (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1022424.00 78.76 3313.43 79.4 SNHG25-206 lncRNA occipital lobe (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 1044.00 0.08 3.38 100.0 SNHG25-206 lncRNA occipital lobe (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 107.06 0.01 0.35 56.64 SNHG25-206 lncRNA occipital lobe (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 256.71 0.02 0.83 55.32 SNHG25-206 lncRNA occipital lobe (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 149.10 0.01 0.48 24.4 SNHG25-206 lncRNA occipital lobe (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 1498.00 0.12 4.85 81.19 SNHG25-206 lncRNA occipital lobe (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 98.00 0.01 0.32 100.0 SNHG25-206 lncRNA occipital lobe (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 511.00 76.96 1.66 100.0 ENST00000778783 lncRNA occipital lobe (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 279.00 78.15 0.90 83.04 MIR155HG-205 lncRNA occipital lobe (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 132.00 5.63 0.43 100.0 ENST00000785178 lncRNA occipital lobe (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 31.00 9.31 0.10 86.11 ENST00000786284 lncRNA occipital lobe (Tissue)