ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 1929.00 0.34 6.25 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 344.00 0.06 1.11 73.04 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 7378.00 1.32 23.91 97.26 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 23.00 0.00 0.07 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 93.00 0.02 0.30 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 483.00 0.09 1.57 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 296021.00 52.80 959.33 99.74 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1057.00 0.19 3.43 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 937.00 0.17 3.04 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 1535.00 0.27 4.97 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 609.00 0.11 1.97 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 122.00 0.02 0.40 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 70.00 0.01 0.23 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 309.00 0.06 1.00 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 6493.00 1.16 21.04 77.51 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 6108.00 1.09 19.79 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 26586.00 4.74 86.16 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 26966.00 4.81 87.39 95.53 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 145022.00 25.87 469.98 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 210.00 0.04 0.68 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 1901.00 0.34 6.16 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 19916.00 3.55 64.54 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 254.00 0.05 0.82 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1429.00 18.95 4.63 100.0 FTX-219 lncRNA occipital lobe (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 3039.00 40.31 9.85 80.89 FTX-219 lncRNA occipital lobe (Tissue)