ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 2267.00 95.05 7.35 100.0 ENST00000630615 snoRNA occipital lobe (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 63.00 82.89 0.20 100.0 DMRT2-209 protein coding occipital lobe (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 2.00 2.63 0.01 100.0 DMRT2-209 protein coding occipital lobe (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 371.00 6.77 1.20 100.0 SNORD98-201 snoRNA occipital lobe (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 4104.00 74.88 13.30 100.0 SNORD98-201 snoRNA occipital lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 108731.82 48.19 352.37 50.72 MIR106AHG-201 lncRNA occipital lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 194.74 0.09 0.63 21.76 MIR106AHG-201 lncRNA occipital lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 112.00 0.05 0.36 100.0 MIR106AHG-201 lncRNA occipital lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 663.70 0.29 2.15 74.16 MIR106AHG-201 lncRNA occipital lobe (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 1328.00 46.22 4.30 100.0 MEG8-222 lncRNA occipital lobe (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 851.00 29.62 2.76 100.0 MEG8-222 lncRNA occipital lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 15778.00 6.75 51.13 94.73 SNHG14-224 lncRNA occipital lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 114111.00 48.84 369.81 94.54 SNHG14-224 lncRNA occipital lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 21003.00 8.99 68.07 100.0 SNHG14-224 lncRNA occipital lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 18889.00 8.09 61.21 94.5 SNHG14-224 lncRNA occipital lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 371.00 0.16 1.20 100.0 SNHG14-224 lncRNA occipital lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 4387.00 1.88 14.22 58.97 SNHG14-224 lncRNA occipital lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 21149.00 9.05 68.54 74.41 SNHG14-224 lncRNA occipital lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 15917.00 6.81 51.58 68.8 SNHG14-224 lncRNA occipital lobe (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 406.32 28.59 1.32 71.92 5S_rRNA.20-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 175.00 6.12 0.57 100.0 HSPA9-211 retained intron occipital lobe (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 588.00 20.56 1.91 36.36 HSPA9-211 retained intron occipital lobe (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 1722.00 88.85 5.58 100.0 DNM3OS-205 lncRNA occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1215.00 0.22 3.94 100.0 GAS5-230 retained intron occipital lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 181.00 0.03 0.59 100.0 GAS5-230 retained intron occipital lobe (Tissue)