ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 1730.00 32.66 5.61 60.45 RNA5-8SN2-201 rRNA occipital lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 21.47 0.41 0.07 63.16 RNA5-8SN2-201 rRNA occipital lobe (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 1.00 100.00 0.00 100.0 MIR7974-201 miRNA occipital lobe (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 8.00 27.59 0.03 100.0 MIR376A1-201 miRNA occipital lobe (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 8.00 27.59 0.03 100.0 MIR376A1-201 miRNA occipital lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 406.00 0.03 1.32 100.0 U2.3-201 snRNA occipital lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 606.74 0.05 1.97 36.66 U2.3-201 snRNA occipital lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 1143602.00 95.90 3706.14 99.88 U2.3-201 snRNA occipital lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 2.00 0.00 0.01 100.0 U2.3-201 snRNA occipital lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 13413.00 1.12 43.47 77.39 U2.3-201 snRNA occipital lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 1700.00 0.14 5.51 33.05 U2.3-201 snRNA occipital lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 1524.00 0.13 4.94 74.67 U2.3-201 snRNA occipital lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 1183.10 0.10 3.83 71.49 U2.3-201 snRNA occipital lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 183.00 0.02 0.59 100.0 U2.3-201 snRNA occipital lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 10.00 0.00 0.03 100.0 U2.3-201 snRNA occipital lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 36.00 0.00 0.12 100.0 U2.3-201 snRNA occipital lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 70.00 0.01 0.23 100.0 U2.3-201 snRNA occipital lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 7916.14 0.66 25.65 44.67 U2.3-201 snRNA occipital lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 4573.09 0.38 14.82 37.9 U2.3-201 snRNA occipital lobe (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 1504.00 0.13 4.87 100.0 U2.6-201 snRNA occipital lobe (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 726.00 1.50 2.35 60.7 ENST00000619323 lncRNA occipital lobe (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 46128.00 95.58 149.49 98.27 ENST00000619323 lncRNA occipital lobe (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 121.00 22.66 0.39 100.0 SCARNA4-202 scaRNA occipital lobe (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 3619.00 78.40 11.73 100.0 ENST00000625572 miRNA occipital lobe (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 11237.00 95.18 36.42 100.0 ENST00000628177 snoRNA occipital lobe (Tissue)