ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 3656.00 86.12 11.85 100.0 RPS11-206 retained intron occipital lobe (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 12580.00 74.82 40.77 76.27 CARMN-209 lncRNA occipital lobe (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 948.00 35.44 3.07 100.0 ENST00000602478 lncRNA occipital lobe (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 301.00 43.19 0.98 100.0 SNORD114-21-201 snoRNA occipital lobe (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 306.00 43.90 0.99 100.0 SNORD114-21-201 snoRNA occipital lobe (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 15343.00 49.05 49.72 100.0 SNORD115-40-201 snoRNA occipital lobe (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 10910.00 98.01 35.36 100.0 MIR98-201 miRNA occipital lobe (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 4622.00 96.84 14.98 100.0 SNORD113-5-201 snoRNA occipital lobe (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 3009.00 90.82 9.75 100.0 MIR15A-201 miRNA occipital lobe (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 85.00 80.19 0.28 100.0 MIR376C-201 miRNA occipital lobe (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 359.00 54.89 1.16 100.0 SNHG21-206 retained intron occipital lobe (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 110.00 35.26 0.36 100.0 SNORD11B-201 snoRNA occipital lobe (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 1952.00 75.05 6.33 100.0 SNORD91B-201 snoRNA occipital lobe (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 12.00 48.00 0.04 100.0 MIR219A2HG-201 lncRNA occipital lobe (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 10824.00 60.96 35.08 69.81 SNORD91A-201 snoRNA occipital lobe (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 3425.00 46.33 11.10 96.37 MIR486-1-201 miRNA occipital lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 18583.00 32.71 60.22 72.6 NOP56-219 retained intron occipital lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 484.00 0.85 1.57 100.0 NOP56-219 retained intron occipital lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 361.00 0.64 1.17 100.0 NOP56-219 retained intron occipital lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 22038.00 38.80 71.42 80.58 NOP56-219 retained intron occipital lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 1132.00 21.37 3.67 45.59 RNA5-8SN2-201 rRNA occipital lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 21.34 0.40 0.07 62.77 RNA5-8SN2-201 rRNA occipital lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 6.00 0.11 0.02 100.0 RNA5-8SN2-201 rRNA occipital lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 105.00 1.98 0.34 100.0 RNA5-8SN2-201 rRNA occipital lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 44.00 0.83 0.14 100.0 RNA5-8SN2-201 rRNA occipital lobe (Tissue)