ENCFF001RLW

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 590.00 0.85 1.91 100.0 SNHG14-220 retained intron occipital lobe (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 46969.00 67.34 152.22 100.0 SNHG14-220 retained intron occipital lobe (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 19444.00 27.88 63.01 100.0 SNHG14-220 retained intron occipital lobe (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 509.00 99.22 1.65 100.0 TEKT4P2-201 transcribed unprocessed pseudogene occipital lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 185716.00 96.84 601.86 99.35 RPL4-202 retained intron occipital lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 165.00 0.09 0.53 100.0 RPL4-202 retained intron occipital lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 241.00 0.13 0.78 100.0 RPL4-202 retained intron occipital lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 56.00 0.03 0.18 100.0 RPL4-202 retained intron occipital lobe (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 94.00 0.05 0.30 100.0 RPL4-202 retained intron occipital lobe (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 5730.00 83.59 18.57 100.0 RPL4-207 retained intron occipital lobe (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 65.00 0.95 0.21 100.0 RPL4-207 retained intron occipital lobe (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 911.00 62.35 2.95 95.09 ENST00000565336 lncRNA occipital lobe (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 351.00 24.02 1.14 92.61 ENST00000565336 lncRNA occipital lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 2694.00 1.45 8.73 100.0 RBMX-210 retained intron occipital lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 312.00 0.17 1.01 100.0 RBMX-210 retained intron occipital lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 1748.00 0.94 5.66 100.0 RBMX-210 retained intron occipital lobe (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 147376.00 79.44 477.61 83.22 RBMX-210 retained intron occipital lobe (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 339.00 5.25 1.10 100.0 RPL4-214 retained intron occipital lobe (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 4680.00 72.42 15.17 100.0 RPL4-214 retained intron occipital lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 1430.77 24.18 4.64 39.56 POLG-DT-202 lncRNA occipital lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 2472.94 41.79 8.01 68.18 POLG-DT-202 lncRNA occipital lobe (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 220.00 3.72 0.71 100.0 POLG-DT-202 lncRNA occipital lobe (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 661.00 57.83 2.14 100.0 ENST00000570843 lncRNA occipital lobe (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 3393.00 74.44 11.00 100.0 MIR497HG-207 lncRNA occipital lobe (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 53555.00 99.26 173.56 99.59 MIR22HG-212 lncRNA occipital lobe (Tissue)