ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 226.00 3.50 0.61 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 40.00 0.62 0.11 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 2159.00 0.06 5.86 97.78 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 12532.00 0.33 34.00 65.67 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 6712.00 0.18 18.21 62.72 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 25898.00 40.36 70.25 77.19 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 3405.00 94.53 9.24 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 2379.00 42.05 6.45 79.22 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 731.00 75.44 1.98 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 40.00 0.01 0.11 58.82 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 28.00 0.01 0.08 41.18 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 315163.00 79.55 854.96 92.81 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 25701.56 19.13 69.72 21.06 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 1869.00 1.39 5.07 80.01 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 95414.08 71.03 258.83 79.15 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 441220.00 90.17 1196.92 99.14 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 563.00 7.27 1.53 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 9780.00 41.82 26.53 78.91 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 246.00 0.01 0.67 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 247.00 0.03 0.67 57.98 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 1409.00 34.32 3.82 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 101.00 5.17 0.27 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 2689134.00 98.49 7294.94 99.87 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 15808.00 27.50 42.88 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 20798.00 36.17 56.42 89.8 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA tongue (Tissue)