ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 2.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 508.00 0.14 1.38 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 317122.00 88.80 860.27 96.7 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 296.00 0.08 0.80 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 110.00 0.49 0.30 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 21239.00 27.80 57.62 35.44 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 18.00 0.08 0.05 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 150.00 1.21 0.41 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 2627.00 21.10 7.13 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 2474.00 19.87 6.71 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 7.00 0.06 0.02 63.64 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 151.00 0.00 0.41 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 5514.00 29.66 14.96 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 4333.00 33.80 11.75 47.39 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 129.00 1.01 0.35 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 4811.00 37.53 13.05 52.61 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 388.00 16.04 1.05 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 1.00 0.04 0.00 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 548.00 34.97 1.49 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 765.00 68.98 2.08 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 1961.00 71.28 5.32 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 22.00 0.34 0.06 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 16.00 0.25 0.04 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 52.00 0.81 0.14 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 234.00 3.63 0.63 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA tongue (Tissue)