ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 62374.20 38.27 169.21 51.75 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 16724.00 10.26 45.37 90.1 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 111.00 0.07 0.30 100.0 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 1330.00 0.82 3.61 100.0 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 51.00 0.03 0.14 100.0 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 3.00 0.00 0.01 100.0 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 1100.00 0.67 2.98 98.83 SNHG5-273 lncRNA tongue (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 773.00 8.06 2.10 65.79 SNHG14-323 lncRNA tongue (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 74577.00 1.87 202.31 79.67 MEG8-251 lncRNA tongue (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 13009.00 0.33 35.29 56.36 MEG8-251 lncRNA tongue (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 3711444.00 93.30 10068.21 99.19 MEG8-251 lncRNA tongue (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 12975.00 0.33 35.20 58.34 MEG8-251 lncRNA tongue (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 14846.00 0.37 40.27 100.0 MEG8-251 lncRNA tongue (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 9319.00 31.08 25.28 60.77 SNHG14-336 lncRNA tongue (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 18351.00 61.19 49.78 85.96 SNHG14-336 lncRNA tongue (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 5089.00 58.81 13.81 93.93 SNHG14-341 lncRNA tongue (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 758.00 18.68 2.06 100.0 NCL-211 retained intron tongue (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 1.00 2.56 0.00 100.0 FMN2-209 protein coding CDS not defined tongue (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 15.00 0.12 0.04 100.0 LINC02739-203 lncRNA tongue (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 97.00 0.78 0.26 27.25 LINC02739-203 lncRNA tongue (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 1060.00 8.49 2.88 100.0 LINC02739-203 lncRNA tongue (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 4230.00 33.88 11.47 100.0 LINC02739-203 lncRNA tongue (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 19.00 0.15 0.05 100.0 LINC02739-203 lncRNA tongue (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 259.00 2.07 0.70 72.75 LINC02739-203 lncRNA tongue (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 106.00 84.80 0.29 100.0 MIR124-1HG-216 lncRNA tongue (Tissue)