ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 303.00 0.02 0.82 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 10855.00 0.89 29.45 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 64.00 0.01 0.17 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 1229.00 0.10 3.33 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 28595.00 2.35 77.57 49.74 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 1713.00 0.14 4.65 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 192159.00 15.78 521.28 95.19 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 1807.00 0.15 4.90 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 639.00 0.05 1.73 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 6.00 0.00 0.02 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 139137.00 11.43 377.44 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 2871.00 0.24 7.79 81.42 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 381.25 0.03 1.03 54.78 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 882.00 0.07 2.39 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 2929.00 0.24 7.95 66.83 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1020.00 0.08 2.77 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 3982.00 0.33 10.80 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 1391.00 0.11 3.77 100.0 SNHG1-248 lncRNA tongue (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 59154.00 41.10 160.47 100.0 SNHG14-315 lncRNA tongue (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 25205.00 17.51 68.37 85.48 SNHG14-315 lncRNA tongue (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 33562.00 23.32 91.05 84.2 SNHG14-315 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 800.00 0.49 2.17 100.0 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 56508.74 34.67 153.29 49.66 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 164.00 0.10 0.44 100.0 SNHG5-273 lncRNA tongue (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 544.00 0.33 1.48 100.0 SNHG5-273 lncRNA tongue (Tissue)