ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 118124.00 96.06 320.44 98.39 ENST00000619323 lncRNA tongue (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 77.00 5.98 0.21 100.0 SCARNA4-202 scaRNA tongue (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 1175.00 73.90 3.19 100.0 ENST00000625572 miRNA tongue (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 25703.00 91.36 69.73 100.0 ENST00000628177 snoRNA tongue (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 2613.00 91.17 7.09 100.0 ENST00000630615 snoRNA tongue (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 194.00 19.88 0.53 100.0 DMRT2-209 protein coding tongue (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 17.00 1.74 0.05 100.0 DMRT2-209 protein coding tongue (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 391.00 10.42 1.06 100.0 SNORD98-201 snoRNA tongue (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 2159.00 57.54 5.86 100.0 SNORD98-201 snoRNA tongue (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 65402.09 41.49 177.42 44.68 MIR106AHG-201 lncRNA tongue (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 259.65 0.16 0.70 19.12 MIR106AHG-201 lncRNA tongue (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 189.00 0.12 0.51 100.0 MIR106AHG-201 lncRNA tongue (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 1037.73 0.66 2.82 76.42 MIR106AHG-201 lncRNA tongue (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 3641.00 5.49 9.88 100.0 MEG8-222 lncRNA tongue (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 29684.00 44.72 80.53 100.0 MEG8-222 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_4119_4213_+ 4119–4213 1.00 0.00 0.00 100.0 SNHG14-224 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 6331.00 8.43 17.17 96.17 SNHG14-224 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 31681.00 42.17 85.94 85.35 SNHG14-224 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 8540.00 11.37 23.17 100.0 SNHG14-224 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 174.00 0.23 0.47 89.23 SNHG14-224 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 155.00 0.21 0.42 100.0 SNHG14-224 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 1982.00 2.64 5.38 46.03 SNHG14-224 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 2562.00 3.41 6.95 61.15 SNHG14-224 lncRNA tongue (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 3155.00 4.20 8.56 71.79 SNHG14-224 lncRNA tongue (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 1280.29 21.63 3.47 69.13 5S_rRNA.20-201 rRNA pseudogene tongue (Tissue)