ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 1850.00 13.99 5.02 38.09 RNA5-8SN2-201 rRNA tongue (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 148.58 1.12 0.40 48.08 RNA5-8SN2-201 rRNA tongue (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 16.00 0.12 0.04 100.0 RNA5-8SN2-201 rRNA tongue (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 118.00 0.89 0.32 100.0 RNA5-8SN2-201 rRNA tongue (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 91.00 0.69 0.25 100.0 RNA5-8SN2-201 rRNA tongue (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 4299.00 32.50 11.66 69.91 RNA5-8SN2-201 rRNA tongue (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 170.07 1.29 0.46 55.04 RNA5-8SN2-201 rRNA tongue (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 9901.00 38.21 26.86 100.0 MIR376A1-201 miRNA tongue (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 6946.00 26.81 18.84 100.0 MIR376A1-201 miRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 1876.00 2.33 5.09 100.0 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 4270.38 5.31 11.58 60.02 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 24724.00 30.76 67.07 98.25 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 16.00 0.02 0.04 100.0 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 12449.00 15.49 33.77 75.07 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 3203.00 3.99 8.69 70.41 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 575.00 0.72 1.56 76.26 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 1677.32 2.09 4.55 23.57 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 140.00 0.17 0.38 100.0 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 37.00 0.05 0.10 100.0 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 263.00 0.33 0.71 100.0 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 199.00 0.25 0.54 100.0 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 5585.72 6.95 15.15 52.08 U2.3-201 snRNA tongue (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 2969.29 3.69 8.05 49.43 U2.3-201 snRNA tongue (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 2118.00 3.05 5.75 100.0 U2.6-201 snRNA tongue (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 1091.00 0.89 2.96 47.25 ENST00000619323 lncRNA tongue (Tissue)