ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 674.00 0.14 1.83 85.32 C19orf48P-203 retained intron tongue (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 76.00 0.02 0.21 100.0 C19orf48P-203 retained intron tongue (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 8.00 0.00 0.02 100.0 C19orf48P-203 retained intron tongue (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 17.00 62.96 0.05 100.0 ENST00000597420 lncRNA tongue (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 83.00 3.43 0.23 100.0 RPS11-206 retained intron tongue (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 1693.00 69.96 4.59 100.0 RPS11-206 retained intron tongue (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 179761.00 56.94 487.65 58.97 CARMN-209 lncRNA tongue (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 2019.00 29.34 5.48 100.0 ENST00000602478 lncRNA tongue (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 3.00 37.50 0.01 100.0 PPFIA1P1-201 processed pseudogene tongue (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 27406.00 50.06 74.35 100.0 SNORD114-21-201 snoRNA tongue (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 10140.00 18.52 27.51 100.0 SNORD114-21-201 snoRNA tongue (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 10.00 1.60 0.03 100.0 SNORD115-40-201 snoRNA tongue (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 60660.00 98.17 164.56 100.0 MIR98-201 miRNA tongue (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 237320.00 94.64 643.79 100.0 SNORD113-5-201 snoRNA tongue (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 1509.00 89.34 4.09 100.0 MIR15A-201 miRNA tongue (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 18416.00 84.53 49.96 100.0 MIR376C-201 miRNA tongue (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 2562.00 56.79 6.95 100.0 SNHG21-206 retained intron tongue (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 80.00 16.39 0.22 100.0 SNORD11B-201 snoRNA tongue (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 2860.00 70.83 7.76 100.0 SNORD91B-201 snoRNA tongue (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 8301.00 53.15 22.52 69.15 SNORD91A-201 snoRNA tongue (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 119360.00 47.90 323.79 98.64 MIR486-1-201 miRNA tongue (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 34631.00 37.12 93.95 78.02 NOP56-219 retained intron tongue (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 1131.00 1.21 3.07 100.0 NOP56-219 retained intron tongue (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 326.00 0.35 0.88 100.0 NOP56-219 retained intron tongue (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 29926.00 32.08 81.18 72.94 NOP56-219 retained intron tongue (Tissue)