ENCFF001RLV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 14177.00 67.88 38.46 100.0 GNL3-211 retained intron tongue (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 6498.00 74.16 17.63 100.0 RPL5-205 retained intron tongue (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 263.00 3.00 0.71 100.0 RPL5-205 retained intron tongue (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 23.00 1.64 0.06 100.0 ZBED9-AS1-201 lncRNA tongue (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 17967.00 88.02 48.74 100.0 RPS3A-206 retained intron tongue (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 15536.00 92.31 42.15 100.0 COX7C-203 protein coding tongue (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 2665.00 1.74 7.23 84.36 RACK1-229 protein coding tongue (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 525.00 0.34 1.42 100.0 RACK1-229 protein coding tongue (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 118374.55 77.34 321.12 84.4 RACK1-229 protein coding tongue (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 23464.75 15.33 63.65 23.86 RACK1-229 protein coding tongue (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 19411.00 16.42 52.66 64.15 RACK1-230 retained intron tongue (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 95772.00 81.02 259.81 96.69 RACK1-230 retained intron tongue (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 8.00 7.84 0.02 100.0 RNA5SP486-201 rRNA pseudogene tongue (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 819.00 77.56 2.22 100.0 SCARNA5-201 scaRNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 1520.00 1.29 4.12 100.0 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 492.00 0.42 1.33 100.0 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 34140.00 28.96 92.61 96.48 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 20648.00 17.52 56.01 97.22 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 68.00 0.06 0.18 100.0 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1426.00 1.21 3.87 61.76 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 5121.00 4.34 13.89 72.34 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 1610.00 1.37 4.37 100.0 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 4433.00 3.76 12.03 78.09 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 1923.00 1.63 5.22 100.0 RNY4-201 misc RNA tongue (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 520.00 0.44 1.41 43.62 RNY4-201 misc RNA tongue (Tissue)