ENCFF000JEI
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | fibroblast of the aortic adventitia (Primary cell) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR000CUV |
| Description: | Part of ENCODE experiment ENCSR000CUV. The libraries contained in this experiment come from aortic adventital fibroblast primary whole cells, HAoAF isolated from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning. |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000772672.1 | ENST00000772672.1_26_113_+ | 26–113 | 4.00 | 0.03 | 0.21 | 100.0 | ENST00000772672 | lncRNA | fibroblast of the aortic adventitia (Primary cell) |
| ENST00000772672.1 | ENST00000772672.1_21_113_+ | 21–113 | 10465.00 | 88.86 | 553.07 | 100.0 | ENST00000772672 | lncRNA | fibroblast of the aortic adventitia (Primary cell) |
| ENST00000788343.1 | ENST00000788343.1_17_107_+ | 17–107 | 2.00 | 1.82 | 0.11 | 20.0 | ENST00000788343 | lncRNA | fibroblast of the aortic adventitia (Primary cell) |
| ENST00000823279.1 | ENST00000823279.1_78_169_+ | 78–169 | 19.00 | 1.54 | 1.00 | 9.22 | ENST00000823279 | lncRNA | fibroblast of the aortic adventitia (Primary cell) |