ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 18782.00 88.91 63.81 96.45 SNHG18-220 lncRNA spinal cord (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 165.00 18.17 0.56 100.0 ENST00000817026 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 3121.00 4.16 10.60 100.0 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 2097.44 2.80 7.13 51.75 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 1421.14 1.90 4.83 38.4 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 1136.00 1.52 3.86 100.0 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 11426.00 15.24 38.82 99.37 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 2702.61 3.61 9.18 39.84 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 2622.89 3.50 8.91 45.0 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 5381.00 7.18 18.28 80.04 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 8699.89 11.61 29.56 51.91 ENST00000823279 lncRNA spinal cord (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 6769.21 9.03 23.00 37.3 ENST00000823801 lncRNA spinal cord (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 765.00 37.65 2.60 45.11 ENST00000827714 lncRNA spinal cord (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 931.00 45.82 3.16 54.89 ENST00000827714 lncRNA spinal cord (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 772.00 3.74 2.62 100.0 GAS5-377 lncRNA spinal cord (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 16396.00 79.36 55.70 100.0 GAS5-377 lncRNA spinal cord (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 907.00 4.39 3.08 100.0 GAS5-377 lncRNA spinal cord (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 511.00 2.47 1.74 100.0 GAS5-377 lncRNA spinal cord (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 35.00 97.22 0.12 100.0 MIR205HG-245 lncRNA spinal cord (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 1275.00 37.35 4.33 100.0 TAF12-DT-204 lncRNA spinal cord (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 240918.00 92.80 818.45 99.71 ZFAS1-238 lncRNA spinal cord (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 1154.00 0.44 3.92 100.0 ZFAS1-238 lncRNA spinal cord (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 4151.00 1.60 14.10 100.0 ZFAS1-238 lncRNA spinal cord (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1326.00 0.51 4.50 100.0 ZFAS1-238 lncRNA spinal cord (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 59857.00 87.78 203.35 100.0 ZFAS1-242 lncRNA spinal cord (Tissue)