ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 72.00 0.42 0.24 100.0 SNHG14-303 lncRNA spinal cord (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 1299.00 1.17 4.41 100.0 SNHG14-306 lncRNA spinal cord (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 3133.00 2.81 10.64 100.0 SNHG14-306 lncRNA spinal cord (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 67162.00 60.33 228.16 96.47 SNHG14-306 lncRNA spinal cord (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 4706.00 4.23 15.99 100.0 SNHG14-306 lncRNA spinal cord (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 166.00 1.06 0.56 100.0 ENST00000666735 lncRNA spinal cord (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 7509.00 47.79 25.51 100.0 ENST00000666735 lncRNA spinal cord (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 20304.00 89.56 68.98 100.0 MEG8-242 lncRNA spinal cord (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 11321.35 25.33 38.46 36.67 SNHG14-312 lncRNA spinal cord (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 19528.68 43.69 66.34 63.26 SNHG14-312 lncRNA spinal cord (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 2639.00 5.90 8.97 100.0 SNHG14-312 lncRNA spinal cord (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 848.00 0.86 2.88 100.0 MEG8-244 lncRNA spinal cord (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 1268.00 1.29 4.31 100.0 MEG8-244 lncRNA spinal cord (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 93475.00 95.29 317.56 99.98 MEG8-244 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 408.00 0.03 1.39 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 4506.00 0.33 15.31 99.29 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 471.30 0.03 1.60 44.76 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 4002.00 0.30 13.60 81.34 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 827112.00 60.99 2809.88 98.75 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 795.00 0.06 2.70 69.68 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 76407.00 5.63 259.57 99.46 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 5182.00 0.38 17.60 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 16694.00 1.23 56.71 96.95 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 197.00 0.01 0.67 100.0 SNHG1-248 lncRNA spinal cord (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 519.00 0.04 1.76 100.0 SNHG1-248 lncRNA spinal cord (Tissue)