ENCFF001RLU

Library Details

Organism: Homo Sapiens
Biosample: spinal cord (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGB
Description: Part of ENCODE experiment ENCSR000AGB. The libraries contained in this experiment come from human fetal spinal cord tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 33257.00 80.50 112.98 84.0 MIR100-201 miRNA spinal cord (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 272.00 82.93 0.92 100.0 MIR301A-201 miRNA spinal cord (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 2900.00 11.38 9.85 25.34 MIR130A-201 miRNA spinal cord (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 22303.00 87.50 75.77 93.89 MIR130A-201 miRNA spinal cord (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 519637.00 98.51 1765.32 99.4 MIRLET7F2-201 miRNA spinal cord (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 625.00 75.76 2.12 100.0 MIR652-201 miRNA spinal cord (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 25.00 78.12 0.08 100.0 MIR653-201 miRNA spinal cord (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1629.00 64.31 5.53 100.0 MIR140-201 miRNA spinal cord (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 1082.00 35.32 3.68 74.62 MIR106B-201 miRNA spinal cord (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 315.00 10.28 1.07 100.0 MIR106B-201 miRNA spinal cord (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 19981.00 25.43 67.88 94.94 SNORD83A-201 snoRNA spinal cord (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 54791.00 69.74 186.14 98.51 SNORD83A-201 snoRNA spinal cord (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 991.00 78.71 3.37 100.0 SNORD41-201 snoRNA spinal cord (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 8.00 0.39 0.03 53.33 MT-TF-201 Mt tRNA spinal cord (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 184.00 8.96 0.63 61.54 MT-TF-201 Mt tRNA spinal cord (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 6.00 0.29 0.02 100.0 MT-TF-201 Mt tRNA spinal cord (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 957.00 16.10 3.25 100.0 MT-TV-201 Mt tRNA spinal cord (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 4998.00 13.37 16.98 100.0 MT-RNR2-201 Mt rRNA spinal cord (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 1949.00 5.21 6.62 88.59 MT-RNR2-201 Mt rRNA spinal cord (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 145.00 0.39 0.49 100.0 MT-RNR2-201 Mt rRNA spinal cord (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 274.00 0.73 0.93 100.0 MT-RNR2-201 Mt rRNA spinal cord (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 1908.00 5.11 6.48 83.25 MT-RNR2-201 Mt rRNA spinal cord (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 114.00 0.31 0.39 100.0 MT-RNR2-201 Mt rRNA spinal cord (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 3.00 0.01 0.01 100.0 MT-RNR2-201 Mt rRNA spinal cord (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 803.00 17.79 2.73 100.0 MT-TI-201 Mt tRNA spinal cord (Tissue)