ENCFF001RLT

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 34.00 0.24 0.06 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 110.00 0.79 0.18 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 29.00 0.21 0.05 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 5658.00 1.67 9.39 97.45 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 769.00 0.23 1.28 66.75 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 314.00 0.09 0.52 56.07 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 1141.00 17.13 1.89 31.17 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 427.00 81.33 0.71 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 552.00 19.23 0.92 97.35 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 436.00 86.17 0.72 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 122.00 0.40 0.20 64.55 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 67.00 0.22 0.11 35.45 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 17766.00 58.20 29.49 89.65 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 10833.57 30.67 17.98 41.04 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 962.00 2.72 1.60 62.75 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 18051.58 51.10 29.96 64.38 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 43179.00 87.16 71.67 93.74 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 132.00 3.96 0.22 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 3408.00 36.08 5.66 90.93 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 203.00 0.02 0.34 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 741.00 0.36 1.23 48.34 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 115.00 15.97 0.19 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 833.00 21.27 1.38 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 1264060.00 97.49 2098.16 99.75 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 213.00 1.19 0.35 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA temporal lobe (Tissue)